Dynamic Binder Exchange Improves Protein Labeling Efficiency in DNA‐PAINT up to 15‐Fold

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Authors: Clemens Steinek, Isabelle Pachmayr, Sebastian Strauss, Monique Honsa, Jisoo Kwon, Ralf Jungmann
Cited by: 2
References: 17

Abstract

Dynamic Binder Exchange (DyBE) enhances DNA-PAINT (Point Accumulation for Imaging in Nanoscale Topography) super-resolution microscopy by exploiting transient, reversible binder-target interactions. DyBE uses DNA-conjugated binders such as nanobodies as both targeting and docking moieties, integrating their characteristic higher off-rates with DNA-PAINT blinking to efficiently sample target sites. This dual-kinetic scheme increases labeling efficiency up to 15-fold, enabling sensitive detection of targets previously inaccessible due to limitations of high-off-rate binders. Using DyBE, the study reveals pre-existing HER2 homodimers and ligand-induced EGFR-HER2 heterodimers at single-protein resolution with high fidelity. DyBE expands the usable binder repertoire, advancing spatial proteomics and enabling mechanistic drug studies of receptor organization and signaling.

Fields of Study & Subjects

Monoclonal and Polyclonal Antibodies Research Advanced Fluorescence Microscopy Techniques Advanced biosensing and bioanalysis techniques

Publication details

Journal / source
Angewandte Chemie International Edition
Publisher
Wiley
Volume
65
Issue
11
Pages
e18685–e18685
Publication date
3 February 2026
Language
EN