ASTROREPOMICS: A curated transcriptomic database for reproductive biology in space

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Authors: Chun-Fan Lung, Kun-I Lin, Yi-Chiung Hsu
Cited by: 0
References: 71

Abstract

Spaceflight imposes substantial physiological stress on reproductive systems, yet relevant transcriptomic data remain fragmented across repositories. To address this need, we developed ASTROREPOMICS, a web-based platform that integrates 17 rigorously normalized and batch-corrected transcriptomic datasets spanning multiple species and reproductive tissues. The platform supports reproducible cross-study and cross-species analyses through standardized metadata and an intuitive user interface. We highlight its utility through two example analyses: (1) irradiated mouse sperm exhibited suppression of RNA splicing and protein-processing pathways alongside activation of interferon- and GPCR-associated programs; and (2) a multi-species intersected-DEG assessment between irradiated rat mammary tissue and microgravity-exposed zebrafish embryos uncovered conserved signatures involving RNA metabolism, cytokine signaling, and angiogenesis. By consolidating dispersed datasets and offering tailored analytical capabilities, ASTROREPOMICS provides a centralized resource for hypothesis generation and strengthens the research infrastructure needed to advance reproductive health studies in space, supporting long-term efforts to safeguard fertility during deep-space exploration.

Fields of Study & Subjects

Spaceflight effects on biology Reproductive Biology and Fertility Sperm and Testicular Function

Publication details

Journal / source
iScience
Volume
29
Issue
4
Pages
115309–115309
Publication date
11 March 2026
Language
EN