Hydroxylase Thermostability Prediction Based on Self-Trained Semisupervised Iteration and Bayesian Dynamic Tuning
Abstract
Current enzyme thermostability prediction models are predominantly designed for cross-family generalization, with limited focus on hydroxylases, which restricts their accuracy and applicability in hydroxylase-specific thermostability design. In this study, we develop HyS-BST, a dedicated self-trained semisupervised framework for hydroxylase thermostability prediction. Leveraging a limited hydroxylase data set, HyS-BST integrates a self-training strategy with Bayesian dynamic tuning to achieve high-precision prediction of mutant thermostability in terms of ΔΔ G . Experimental results demonstrate that after only ten training iterations, HyS-BST attains a coefficient of determination ( R 2 ) of 0.96, a Pearson correlation coefficient (PCC) of 0.98, and a root mean squared error (RMSE) as low as 0.06 on the test set. Compared with the optimal cross-family generalization model, HyS-BST improves PCC and RMSE by approximately 70%. Overall, this framework provides a specialized, efficient, and cost-effective solution for hydroxylase thermostability prediction, substantially reducing the candidate search space and experimental resources required for downstream validation.
Fields of Study & Subjects
Machine Learning in Bioinformatics
Enzyme Catalysis and Immobilization
Genomics and Phylogenetic Studies
Publication details
- Journal / source
- Journal of Chemical Information and Modeling
- Publisher
- American Chemical Society (ACS)
- Volume
- 66
- Issue
- 6
- Pages
- 3383–3396
- Publication date
- 5 March 2026
- Language
- EN