Can ferric-oxyl excited states explain elongated iron-oxygen bonds in heme peroxidase catalytic intermediates?

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Authors: L.J. Williams, Jos J. A. G. Kamps, Adrian M. V. Branzanic, Maria Lehene, Kristina Lundgren, Ulf Ryde, Kuntal Chatterjee, Margaret Doyle, Philipp S. Simon, Hiroki Makita, Amy J. Thompson, Aaron S. Brewster
+15 more Tiankun Zhou, Marina Lučić, Michael T. Wilson, Pierre Aller, Juan Sánchez-Weatherby, Leland Gee, Sebastian Dehe, Sandra Mous, Junko Yano, Vittal K. Yachandra, Michael A. Hough, Allen M. Orville, Jan Kern, Radu L. Silaghi-Dumitrescu, Jonathan A. R. Worrall
Cited by: 2
References: 80

Abstract

Abstract The use of X-ray structures to determine and interpret the ferryl iron-oxygen bond order in molecular oxygen-activating heme enzymes has, in the past, been controversial. This has mainly stemmed from the susceptibility of ferryl species to X-ray-induced electronic state changes. In this work we establishe using time-resolved serial femtosecond X-ray crystallography (tr-SFX) on a dye-decolourising peroxidase that the ferryl intermediate species (Compounds I and II) captured following in situ mixing of microcrystals with H 2 O 2 have single, rather than the double bond character expected. X-ray emission validated tr-SFX data with quantum refinement, time-dependent-DFT calculations and QM/MM geometry optimizations together support the concept that the single iron-oxygen bond character is not an indication of ferryl reduction or a protonated form (Fe IV -OH) but is instead attributed to the existence of accessible excited states possessing ferric-oxyl (Fe III –O •– ) character. Such states offer insight into the nature of ferryl heme.

Fields of Study & Subjects

Enzyme-mediated dye degradation Metal-Catalyzed Oxygenation Mechanisms Photosynthetic Processes and Mechanisms

Publication details

Journal / source
Nature Communications
Publisher
Springer Science and Business Media LLC
Volume
17
Issue
1
Publication date
3 February 2026
Language
EN