Structural and mechanistic insights into azetidine-associated αKG-NHFe enzyme OkaE with multifunctional catalysis

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Authors: Xinye Wang, Junjie Yu, Tonghai Liu, Xi Zhang, Mengxi Ju, Zhekai Xie, Nathchar Naowarojna, Linlu Ping, Yaohong Dong, Biyu Gong, Yongtao Xie, Yao Nie
+7 more Tom Hsiang, Rongjie Wu, Lixin Zhang, Pinghua Liu, Guoliang Zhu, Wupeng Yan, Xueting Liu
Cited by: 1
References: 90

Abstract

α-Ketoglutarate-dependent mononuclear non-haem iron (αKG-NHFe) enzymes are catalytically versatile, yet OkaE is unique for synthesizing azetidine rings via C–C bond formation. Here, we report the unexpected multifunctionality of OkaE, which catalyzes sequential oxidations. Isotopic labelling studies demonstrate that a second O₂ molecule participates in sequential epoxidation and ring cleavage, incorporating two oxygen atoms within a single catalytic cycle to form the previously unknown structure, neuokaramine IV. Crystal structures of the OkaE•CoII•αKG•okaramine A complex unveil a unique methionine–π interaction network that facilitates substrate binding. Mutational and crystallographic analyses suggest this network fine-tunes substrate orientation relative to the metallo-centre, activating distinct reaction pathways at the 3a-OH or C8a positions. QM/MM simulations indicate that dynamic rotation of the FeIV=O species initiates the cycle, enabling reaction bifurcation. This study elucidates the structural and mechanistic basis of OkaE’s reactivity, highlighting its potential as a programmable biocatalyst for natural product diversification. OkaE is an αKG-NHFe enzyme capable of synthesizing the pharmacophoric motif azetidine ring via unique C–C bond formation. Here, the authors report the multifunctionality of OkaE, which enables not only azetidine formation but also scaffold diversification through sequential oxidations, including hydroxylation, epoxidation, and ring cleavage.

Fields of Study & Subjects

Metalloenzymes and iron-sulfur proteins Synthesis and Catalytic Reactions Metal-Catalyzed Oxygenation Mechanisms

Publication details

Journal / source
Nature Communications
Publisher
Springer Science and Business Media LLC
Volume
17
Issue
1
Publication date
17 February 2026
Language
EN