Whole genome sequencing data of early- and late-onset colorectal cancer in 99 Korean patients

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Authors: Jae-Yoon Kim, Ye Jin Ha, Seung-Jin Park, Sun-Woo Lee, Seon-Yeop Kim, Seung-Eun Oh, J. Daniel Park, Ka Hee Tak, Yong Sik Yoon, Jong Lyul Lee, S. H. Kim, Chan Wook Kim
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References: 32

Abstract

Colorectal cancer (CRC) is the third most prevalent cancer type worldwide. Despite improvements in screening programs, the incidence of early-onset CRC (EOCRC) in patients under 50 years old is rapidly increasing, including in Korea, in contrast to the decreasing trend of late-onset CRC (LOCRC). However, a comprehensive biological understanding of CRC's coding and non-coding variants, onset-dependent prognostic variables, and the genetic and transcriptomic differences between EOCRC and LOCRC remains limited. To provide insights into this, we present a high-quality multi-omics dataset consisting of whole genome sequencing (WGS) and RNA sequencing (RNA-seq) data from 49 EOCRC and 50 LOCRC patients. WGS was performed using the DNBSEQ-T7 platform, generating 1.409 billion reads at an average depth of 37.70×. RNA-seq data previously generated from the same samples are included to support integrative analysis. This dataset enables comprehensive exploration of genomic and transcriptomic alterations in CRC and serves as a valuable resource for identifying onset-specific biomarkers and molecular features, ultimately supporting improved diagnosis and therapeutic strategies.

Fields of Study & Subjects

Genetic factors in colorectal cancer Colorectal Cancer Treatments and Studies Cancer Genomics and Diagnostics

Publication details

Journal / source
Scientific Data
Volume
13
Issue
1
Pages
198–198
Publication date
8 January 2026
Language
EN