Making Mathematical Online Resources FAIR: At the Example of Small Phylogenetic Trees

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Authors: Tabea Bacher, Marina Garrote-López, Christiane Görgen, Marius Neubert
Cited by: 0

Abstract

We report on the process of taking an early 2000's mathematical library, the Small Phylogenetic Trees, and transforming it into a FAIR, modern, and sustainable repository for data from algebraic phylogenetics. This process is based on a three-fold strategy: (1) writing a software package which enables the user to reproduce results of the database; (2) setting up a user-friendly new website with cross links to theoretical publications, code snippets, and serialized output of computations; and (3) all-the-while documenting the steps we take in order to derive lessons learned which may be generalised to other such projects. This paper addresses (3). (1) is found in https://docs.oscar-system.org/dev/Experimental/AlgebraicStatistics/phylogenetics, and (2) is located at https://algebraicphylogenetics.org.

Fields of Study & Subjects

Distributed and Parallel Computing Systems Mathematics Computing and Information Processing

Publication details

Journal / source
Notices of the American Mathematical Society
Volume
73
Issue
05
Publication date
1 May 2026
Language
EN