Toward smart health monitoring: multimodal sensing and intelligent disease diagnosis in poultry and livestock
Abstract
Multimodal sensing provides valuable data and knowledge for intelligent disease diagnosis. Intelligent disease diagnosis is evolving from text-based understanding toward multimodal fusion and knowledge-driven reasoning. Future efforts should prioritize devices for definite disease diagnosis and diagnostic frameworks integrating prescription generation for intelligent decision support. Health management of livestock and poultry production is critical for ensuring food safety, animal welfare, and production sustainability. Farm scales expanded rapidly in China over the last two decades. For example, the capacity of a single laying hen house increased from thousands to hundreds of thousands. Large-scale farm typically refers to an annual slaughtered volume of >100,000 birds or >50,000 pigs. As such, the prevention and control of animal diseases have become increasingly complex. For instance, African Swine Fever (ASF), which can have a mortality rate of up to 100%, exemplifies the devastating impact of animal epidemics. The largest ASF outbreak in China in 2018 led to the death of 43.46 million pigs, causing an estimated US$14.5 billion in indirect economic losses (You et al., 2021). However, many poultry and livestock farms often suffer from limited diagnostic infrastructures and professional expertise. Veterinarians are usually responsible for multiple farms, which may increase the risk of cross-infection and substantial economic loss. In addition, the shortage of licensed veterinarians further increases the difficulty of timely health management (Yang et al., 2025). Recent advances in artificial intelligence (AI) and smart sensing offer promising solutions and enable automated health monitoring and intelligent diagnostic systems, which marks a crucial step toward the digital transformation of livestock health management. The evolution of intelligent disease diagnosis has progressed through three milestones, ie, the Database Matching System (DMS), the Expert System (ES), and the Large Language Model (LLM). The DMS, originating in the 1960s, marked the beginning of intelligent diagnosis. It functions by calculating similarity scores through keyword matching and weighted symptom scoring to suggest suspected diseases. While effective for common, well-documented diseases, the DMS accuracy declines in cases involving atypical symptoms, co-infections, or emerging diseases (Houe et al., 2011). Today, database-driven systems are incorporated into cloud-based diagnostic platforms and veterinary knowledge graphs, continuing to serve as useful tools for rapid, simple, and low-cost screening on small- and medium-scale farms. Building upon the DMS, the ES are developed to emulate specialists' reasoning processes through if-then rules. The MYCIN system, introduced by Stanford University in the 1970s for diagnosing human infectious diseases, exemplified this approach (Saeidnia and Nilashi, 2025). In animal management, for example, the ES has been used to diagnose diseases such as blue ear in pigs, Newcastle disease in poultry, respiratory disease in dairy cattle. While these systems provide interpretable reasoning chains, they lack self-learning capability and adaptability, making them less effective for complex or uncertain scenarios. By the 2020s, the field has transitioned from rule-based reasoning to data-driven learning. The advent of LLMs such as Generative Pre-trained Transformer (GPT) and Pathways Language Model (PaLM) leverages massive datasets and deep learning architectures to autonomously acquire knowledge and detect subtle correlations across modalities (Jin et al., 2025). Although LLMs exhibited broad coverage and strong cross-domain integration ability, their “black-box” nature limits interpretability and complicates the validation of knowledge sources. Effective intelligent diagnosis in poultry and livestock health relies fundamentally on the reliability of sensed data. Traditional approaches have often relied on single-modality data due to its simplicity, cost-effectiveness, and ease of deployment. While these approaches can provide meaningful insights under controlled conditions, and form the basis of early database matching and expert system-based diagnostics, they suffer from limitations in robustness and accuracy due to environmental interference, noise, or biological variability. For instance, infrared thermal imaging may misinterpret surface heat changes caused by airflow as fever, and RGB cameras may struggle to estimate body weight under poor lighting or occlusion (Liu et al., 2023). To overcome these constraints, recent research emphasizes multimodal sensing as a powerful approach by integrating heterogeneous data sources. The advantages of multimodal sensing over single-modality approaches are threefold. First, redundancy increases resilience, allowing one modality to compensate when another is compromised. Second, complementarity allows each sensor to contribute unique insights to the same health indicator. Third, robustness is achieved through integrating multiple data streams, enabling diagnostic models to generalize across varying farm environments and animal populations. Therefore, this review will focus on the applications of multimodal fusion in health information perception of farm animals, summarizing recent achievements in physiological condition assessment, behavior recognition and abnormal sound analysis. Afterwards, multimodal fusion-based technologies of diagnosis models will be introduced (Figure 1). Finally, the challenges and limitations of intelligent diagnosis of livestock and poultry, along with future perspectives, will be discussed to provide insights into the revolution of farm animal health management. Multimodal sensing and intelligent disease diagnosis in poultry and livestock. The deep-learning based disease diagnosis model was adapted from Yang (2025). LLM donated Large Language Model. Multimodal sensing enhances animal health monitoring by automatic physiological condition assessment, behavior recognition and abnormal sound analysis. As sensors become increasingly common in livestock and poultry farms, multiple data modalities can be collected simultaneously. Typically, information contained in different data modalities varies and is specific to particular scenarios. However, in farm environments, the application scenario may pose challenges due to many factors, such as changing illumination, background noise, and limited image resolutions, making it unreliable to rely on a single data modality for decision-making (Yin et al., 2023; Ma et al., 2025). Multi-modality fusion integrates multiple sources of data, such as environmental factors, images, and audio, providing a more comprehensive understanding of the environment in livestock and poultry farms compared with a single data modality and enabling more accurate results in challenging farming environments (Kalamkar, 2023; Tang et al., 2023). Therefore, it is necessary to employ multimodal fusion to enhance the animal health monitoring and disease diagnosis. According to the fusion level, the deep learning-based multimodal data fusion can be divided into data-level fusion, feature-level fusion, and decision-level fusion (Tang et al., 2023), as shown in Figure 2. Multimodal fusion framework, taking RGB-D fusion as an example (Fu et al., 2022). (a) Early-fusion. (b) Late-fusion. (c) Middle-fusion. CNN donated Convolutional Neural Network, and Concat donated concatenate. Among the sensors used in livestock and poultry farms, cameras are one of the most widely used devices significantly contributing to the non-contact perception and visible livestock management by computer vision (Li et al., 2022a). Generally, image modalities used in computer vision for livestock management include Red-Green-Blue (RGB), depth (Figure 3), and thermal (Figure 4) images. Given the low cost and high accessibility, RGB images are one of the most common image modalities, offering rich color and texture information with a high spatial resolution (Ma et al., 2023). As a result, RGB images are widely adopted in various applications in livestock and poultry farms. Nevertheless, the long-existing challenges inherent in complicated farming conditions, such as changing illumination and clutter backgrounds (Lamping et al., 2022; Li et al., 2022a), need to be addressed before the RGB image-based methods can achieve improved performance (Liu et al., 2022). Paired RGB (left) and Depth (right) images (He et al., 2023). A Microsoft Azure Kinect DK camera was adopted to simultaneously collect the paired RGB-D images. The camera was horizontal to the ground at a height of 2.3 m above the feeding passageway. Paired thermal (top) and RGB (bottom) images of six different regions on pig body surface (Xie et al., 2023). A: forehead, eyes, and nose. B: ear root, and back. C: anus. The thermal and visible light images could be obtained at the same time by using an infrared thermal imaging camera. Recent advancements in imaging technology and hardware have made depth images readily available through consumer-level RGB-D cameras, effectively complementing the RGB images. In a depth image, each pixel represents the distance from the camera to the corresponding object, which favors the 3D reconstruction of animals (Li et al., 2022b). Furthermore, depth images provide shape information, which helps extract animal objects from clutter backgrounds (Xu et al., 2022). In most cases, depth images are combined with RGB images since RGB images can remedy the defects of coarse resolution and details (Liu et al., 2022; He et al., 2023). Typically, RGB images have high spatial resolution along with rich color and texture information (Ma et al., 2023), whereas they are highly susceptible to illumination variations and lack structure information (Liu et al., 2022; Xu et al., 2022). In contrast, depth images are robust to illumination changes and provide substantial shape and 3D structure details (Xu et al., 2022; He et al., 2023), while they lack fine object details (Liu et al., 2022; He et al., 2023). The RGB-D fusion leverages the complementary strengths of both modalities, enabling a more comprehensive understanding of animal health and improving the estimation of physiological traits, such as pig body weight (He et al., 2023), body size (Li et al., 2022b), posture (Xu et al., 2023) and appearance (Lamping et al., 2022). Thermal images can also serve as a complementary modality, especially under low illumination and complex background conditions due to the robustness against lighting variations (Wu et al., 2023). Thermal images measure the animal surface temperature (Cai et al., 2023; Xie et al., 2023), which is a key indicator of animal health and welfare (Cai et al., 2023). Consequently, thermal images are widely used in livestock and poultry farms to detect animal temperature and diseases (Xie et al., 2023). Additionally, thermal images can also aid in extracting animals from clutter backgrounds, as animals typically have higher temperatures than objects in the backgrounds (Zhong and Yang, 2022). Although thermal images have shown great potential in livestock and poultry farms, the high cost of the thermal infrared camera significantly hinders their use. Besides, image alignment is also required for fusion between RGB and thermal images. Notably, in applications where thermal images are used to measure animal surface temperatures, the accuracy may be influenced by the ambient temperature and humidity, measuring distance and angle, and emissivity of measuring parts (Xie et al., 2023). In addition to camera, acoustic sensors offer a valuable means of linking animal vocalizations to health, welfare, and environmental impact (Ma et al., 2025). In livestock and poultry farms, acoustic technologies have been developed to detect a multitude of traits and behaviors, such as coughing (Shen et al., 2022; Ma et al., 2025), body weight (Fontana et al., 2017), diseases (Cuan et al., 2020), and feeding behavior (Liao et al., 2022). Given the complicated acoustic environment in livestock and poultry farms (Shen et al., 2022; Ma et al., 2025), the sensing models relying solely on acoustic features may not achieve satisfactory accuracy. Instead, fusing the acoustic features with other powerful features can improve the detection accuracy (Shen et al., 2022; Ma et al., 2025), as shown in Figure 5. Although promising results have been reported (Shen et al., 2022; Ma et al., 2025), it is worth noting that the features mentioned above are derived from the same data as the acoustic features. Therefore, the fusion of acoustic data and other data modalities is yet to be explored. Structure of the multimodal pig audio representation and fusion framework (Ma et al., 2025). A was a given audio clip, A1 and A2 were two randomly cropped segments, A2′ was the spectral representation of A2. z1 and p1 were the output of A1, z2 and p2 were the output of A2′, Stop grad indicated the stop gradient operation and MLP donated multilayer perceptron. Traditional diagnostic methods relying on manual observation and laboratory testing often suffer from low efficiency, high costs, and limited accuracy. With the advancement in natural language processing, computer vision, audio signal analysis, and knowledge graph, researchers (Hoang et al., 2023; Mustapoevich et al., 2023; Wang et al., 2024; Yu et al., 2024; Li et al., 2025) have developed intelligent diagnostic models that integrate multimodal and knowledge-driven approaches to improve accuracy, interpretability, and responding speed. Text-based intelligent diagnosis models form the foundation of this field. Yu et al. (2024) developed a Bidirectional encoder representation from transformers-Bidirectional long short-term memory network-Conditional random field (BERT-BiLSTM-CRF) model that effectively handled sparse domain texts with an F1 Score (a widely used performance metric in machine learning) of 96.38%. Wang et al. (2024) integrated BERT semantic vectors with knowledge embeddings to analyze 11,401 laying-hen cases, significantly improving diagnostic accuracy in complex textual contexts. Similar knowledge-driven text learning methods have also shown robustness in scenes where the number of training samples was limited (Wang et al., 2023). Although these models offer strong semantic comprehension, they are still limited by such as data text and poor (Yang et al., 2025). To overcome the limitations of diagnosis multimodal diagnosis models that integrate and information provide a Li et al. an for image and data Yang et al. developed a multimodal disease model that integrates CNN and BERT through improving by The fusion for diagnosis further this approach by through semantic a of Although challenges in data multimodal and these that integrating image and text data enhances robustness and diagnostic The of audio such as and provides information for disease diagnosis. Mustapoevich et al. reasoning to diseases, the potential of data in Yang incorporated and into a model for and used a to image, and text features (Figure an of in respiratory disease While these models enable early they still data and to model structure of Yang (2025). donated vision models reasoning and domain knowledge into intelligent diagnosis. Wang et al. (2024) the encoder representation from disease knowledge model (Figure for laying-hen disease diagnosis. The model integrated knowledge into and enhances with a of and by et al. introduced the which incorporated embeddings for disease reasoning. frameworks between textual data and biological allowing disease reasoning and improved model structure of (Wang et al., research a from text-based understanding toward multimodal fusion and reasoning. challenges in across modalities, and Building multimodal datasets and reasoning into diagnostic systems will be crucial for interpretable and intelligent diagnosis for livestock and poultry diseases. 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Fields of Study & Subjects
Food Supply Chain Traceability
Animal Behavior and Welfare Studies
Advanced Chemical Sensor Technologies
Publication details
- Journal / source
- Animal Frontiers
- Publisher
- Oxford University Press (OUP)
- Volume
- 16
- Issue
- 2
- Pages
- 51–62
- Publication date
- 4 January 2026
- Language
- EN