Potyviruses recruit host eIF4A3 to block m6A-mediated RNA decay by steric hindrance of viral RNA methylation in plants

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Authors: Dezhi Peng, Laihua Dong, Pei Wang, Lianyi Zang, Jinhao Xie, Hao Wang, X. Li, Fan ZaiFeng, Tao Zhou, Kaitong Du
Cited by: 3
References: 81

Abstract

N 6-methyladenosine (m6A), a critical epitranscriptomic modification, regulates RNA metabolism and antiviral defenses. However, how pathogens evade m6A-mediated RNA decay in plants remains poorly understood. Here, we uncover a dynamic m6A modification arms race during infection of sugarcane mosaic virus (SCMV), a prevalent potyvirus that infects maize and causes 20%-80% yield loss. We demonstrate that maize m6A methyltransferase (ZmMTA) specifically deposits m6A at A6556 of the SCMV genomic RNA, enabling recognition by the m6A reader EVOLUTIONARILY CONSERVED C-TERMINAL REGION 23 (ZmECT23). ZmECT23 directly recruits the ZmCCR4-NOT (carbon catabolite repressor 4-negative on TATA) complex to facilitate viral RNA decay. Strikingly, SCMV counters the defense via its nuclear inclusion protein a protease (NIa-Pro), which hijacks maize eukaryotic initiation factor 4A-III (ZmeIF4A3) into viral replication complexes. ZmeIF4A3 sterically blocks ZmMTA-mediated m6A deposition, thereby preventing viral RNA from degradation. Mechanistic conservation is observed in potato virus Y and turnip mosaic virus, two other potyviruses that are modified with m6A. Our study identifies eIF4A3 as a key m6A regulator in plants and reveals a strategy used by potyviruses to subvert m6A-based immunity via exploiting host RNA helicases. These findings provide mechanistic insights into host-pathogen interactions as mediated by m6A and suggest eIF4A3 as a potential target for engineering m6A-based antiviral crops.

Fields of Study & Subjects

RNA modifications and cancer Plant Virus Research Studies Bacteriophages and microbial interactions

Publication details

Journal / source
Nucleic Acids Research
Publisher
Oxford University Press (OUP)
Volume
54
Issue
1
Publication date
5 January 2026
Language
EN