DeepKinomeWeb: a quantitative, panel-level platform for kinase inhibitor screening and selectivity profiling

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Authors: Jisu Eun, Yeeun Lee, Seunghoon Yang, Donghwan Choi, 나현수, Hyeyun Cho, Seungyoon Nam, Jinhyuk Lee
Cited by: 3
References: 33

Abstract

Protein kinases are central targets in drug discovery, yet early-stage development of potent and selective inhibitors remains challenging due to high experimental costs and limited interpretability of large-scale screening data. Here, we present DeepKinomeWeb, an integrated web-based platform that transforms competition-based high-throughput screening data into actionable insights for kinase inhibitor prioritization. Built upon our previously validated deep learning regression model, DeepKinome, the platform enables quantitative prediction of kinase-inhibitor binding affinities and provides panel-level visualization of selectivity landscapes, selectivity metric calculations, and integrated structural and physicochemical analyses. Through its user-friendly interface, DeepKinomeWeb supports rational, data-driven decision-making for biologists and medicinal chemists, lowering the barrier to systematic selectivity assessment in kinase inhibitor discovery. DeepKinomeWeb is freely available to all users without any login requirement at https://str.kribb.re.kr/deepkinome.

Fields of Study & Subjects

Computational Drug Discovery Methods Cell Image Analysis Techniques Bioinformatics and Genomic Networks

Publication details

Journal / source
Nucleic Acids Research
Publisher
Oxford University Press (OUP)
Volume
54
Issue
W1
Pages
W246–W256
Publication date
16 April 2026
Language
EN