Figure S2 from Circulating Neoantigen- and Viral Oncoprotein–Specific CD8+ T Cells Share a Transcriptional Signature

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Authors: Saumya Jani, Tomas Bencomo, Carolyn Shasha, Thomas H. Pulliam, Ana Jojic, Candice D. Church, Ted A. Gooley, David M. Koelle, Evan William Newell, Paul Nghiem
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Abstract

Supplemental Figure S2. Cluster aggregation based on phenotype. A) UMAP plot with pre-aggregation clusters with numerical labels. B) UMAP plot with post-aggregation clusters with phenotype labels. C) Dot plot with expression of key markers in pre-aggregation clusters used to phenotype clusters (from Figure 1D). D) Heat map of cluster-defining genes and expression across pre-aggregation clusters.

Fields of Study & Subjects

vaccines and immunoinformatics approaches CAR-T cell therapy research T-cell and B-cell Immunology

Publication details

Publication date
8 January 2026