Glycoinformatics

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Authors: Shih-Yi Hsiung, Achille Zappa, Yukie Akune, Kiyoko Flora Aoki-Kinoshita
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Abstract

Glycoinformatics originated with pioneering initiatives like CarbBank in the 1980s, which represented the first systematic digital repository for carbohydrate structures. Despite this early foundation, the dis-cipline still confronts significant computational and methodological obstacles. Key challenges include modeling complex multivalent binding patterns in protein-carbohydrate and lipid-carbohydrate interac-tions, developing complete glycosylation maps for diagnostic biomarkers, and addressing the inherent variability of non-template-based glycan synthesis pathways. However, recent decades have brought substantial advances in structural analysis capabilities, particularly through artificial intelligence (AI), machine learning (ML), and enhanced glycomics databases. These technological developments offer promising solutions to longstanding problems in the field. This review examines the current landscape of glycoinformatics technologies, including approaches for glycan representation, methods for visualizing glycoconjugates and glycosylation patterns, Semantic Web principles and applications, glycomics data-base systems, and artificial intelligence innovations and implications. The discussion focuses on how these emerging tools are addressing and potentially resolving the persistent challenges that have histori-cally limited progress in computational glycobiology. The goal is to provide essential glycoinformatics concepts, platforms, and application tools to help glycoscientists overcome their research obstacles.

Fields of Study & Subjects

Glycosylation and Glycoproteins Research Carbohydrate Chemistry and Synthesis vaccines and immunoinformatics approaches

Publication details

Journal / source
CRC Press eBooks
Pages
183–205
Publication date
12 March 2026
Language
EN
Document type
Book chapter