ERGA-BGE reference genome of Holothuria (Platyperona) sanctori: a sea cucumber from the Mediterranean Sea
Abstract
Holothuria sanctori is a common species of sea cucumber found in the Mediterranean Sea and the Northeast Atlantic Ocean. It typically inhabits shallow rocky and sandy seabeds, where it plays a key ecological role as a sediment engineer processing organic matter ts and thereby contributing to nutrient cycling. As an edible species, H. sanctori is harvested in several countries. Although it is currently listed as a species of "Least Concern" on the IUCN Red List, the absence of a regulatory framework to prevent overexploitation poses a risk of population decline. Given its ecological significance and economic value , H. sanctori has become a focal point in both marine conservation and aquaculture research. The entirety of the genome sequence was assembled into 23 contiguous chromosomal pseudomolecules. This chromosome-level assembly encompasses 1.2 Gb, composed of 135 contigs and 46 scaffolds, with contig and scaffold N50 values of 19.9 Mb and 50.7 Mb, respectively.
Fields of Study & Subjects
Echinoderm biology and ecology
Genomics and Phylogenetic Studies
Chromosomal and Genetic Variations
Publication details
- Journal / source
- Open Research Europe
- Volume
- 5
- Pages
- 297–297
- Publication date
- 27 January 2026
- Language
- EN