RNA extraction for Kryptoperidinium triquetrum CCAP 1116/3 and Nitzschia laevis UTEX_B_2047 v1
Abstract
A methodology for cell harvesting and RNA extraction from Kryptoperidinium triquetrum CCAP 1116/3 and Nitzschia laevis UTEX_B_2047 for the purposes of RNA-seq. The cells of these two species have tough cell walls, which prevent them lysing from the addition of TRIzol alone. Therefore, they require mechanical lysis using a pestle. Combining standard TRIzol phase separation by centrifugation with the Zymo Research Direct-zol RNA Kit in this protocol improves sample purity far greater than using either of these two methods on their own.
Fields of Study & Subjects
Molecular Biology Techniques and Applications
Protist diversity and phylogeny
Genomics and Phylogenetic Studies
Publication details
- Publication date
- 3 February 2026
- Language
- EN
- Document type
- Preprint