Genome assembly and annotation of Cucumis melo L. var. chate

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Authors: Marzia Guerriero, Stefano Pavan., Matteo Schiavinato, Marco Di Marsico
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Abstract

This repository hosts the genome assembly of Cucumis melo L. var. chate, reconstructed via a hybrid assembly of PacBio HiFi, ONT ultra-long, and Hi-C sequencing technologies. Data includes: - FASTA files: Primary and masked genome assemblies. - Comparative Tools: A conversion table linking this assembly to the existing reference. - Annotation Files: Gene models, transcriptomes, protein sequences, and transposable element (TE) characterizations. - Functional Annotation: A comprehensive table mapping Gene IDs to Gene Names, Gene Ontology (GO) terms, and detailed Functional Descriptions, facilitating downstream biological interpretation.

Fields of Study & Subjects

Advances in Cucurbitaceae Research Genomics and Phylogenetic Studies Chromosomal and Genetic Variations

Publication details

Journal / source
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Publication date
24 March 2026
Language
EN
Document type
Dataset