Annotix: An Integrated Desktop Platform for Multi-Modal Data Annotation, Collaborative Labeling, and End-to-End Machine Learning Training

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Authors: Nicolás Baier Quezada, Vanessa Uribe Hernández, Haydeé Barrientos Toledo, Cristina Vargas Bustamante, Martin Arrigo Figueroa, Aaron Mancilla Leiva, Felipe Brana Peña, Fernanda López‐Moncada
Cited by: 1

Abstract

The preparation of annotated datasets remains a critical bottleneck in the machine learning (ML) pipeline. Existing tools are fragmented across cloud-hosted services, self-hosted web applications, and lightweight desktop tools—none simultaneously ad-dressing diverse annotation modalities, offline-first operation, integrated training, and serverless collaboration. We present Annotix, an open-source, cross-platform desktop application built on a Rust backend (Tauri 2) and React 19 frontend, designed to unify the entire ML data preparation workflow within a single privacy-preserving environ-ment. To evaluate its practical utility, we conducted a controlled annotation efficiency study using 60 synthetic images (bounding box and mask tasks) annotated by three expert evaluators across Annotix, CVAT, and Label Studio, analyzed via Krus-kal-Wallis with Dunn–Bonferroni post-hoc tests, and a heuristic usability evaluation over standardized tasks on real medical images (retinographies and otoscopies). Re-sults demonstrate that Annotix achieves statistically significant annotation efficiency relative to established tools while offering substantially broader feature coverage, in-cluding 7 image annotation primitives, 19 ML training backends, ONNX-based infer-ence-assisted labeling, and serverless P2P collaboration. Annotix provides a complete, privacy-preserving ML data preparation workflow suited to regulated domains such as medical imaging and ecological monitoring and is freely available under the MIT license.

Fields of Study & Subjects

Cell Image Analysis Techniques Scientific Computing and Data Management Artificial Intelligence in Healthcare and Education

Publication details

Journal / source
Preprints.org
Publisher
MDPI AG
Publication date
14 April 2026
Document type
Preprint