Subtype-DIVIDE: A Self-supervised Diffusion Contrastive Framework for Multi-omic Cancer Subtyping

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Authors: Liting Zhang, Zefeng Li, Xian Mallory
Cited by: 0

Abstract

Subtype-DIVIDE is a self-supervised diffusion contrastive learning framework for multi-omic cancer subtyping. The capsule provides code to preprocess multi-omic data, train the Subtype-DIVIDE model, and evaluate discovered cancer subtypes using downstream clustering and survival/clinical analyses. This compute capsule is intended to support reproducibility of the experiments described in the associated manuscript. It includes the main training/inference script and helper utilities, along with instructions to run the pipeline on supported datasets.

Fields of Study & Subjects

Bioinformatics and Genomic Networks Gene expression and cancer classification Single-cell and spatial transcriptomics

Publication details

Journal / source
Code Ocean
Publication date
1 January 2026
Language
EN