Path Sampling for Rare Events Boosted by Machine Learning

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Authors: Porhouy Minh, Sapna Sarupria
Cited by: 0

Abstract

The study by Jung et al. (Jung H, Covino R, Arjun A, et al., Nat Comput Sci. 3:334-345 (2023)) introduced Artificial Intelligence for Molecular Mechanism Discovery (AIMMD), a novel sampling algorithm that integrates machine learning to enhance the efficiency of transition path sampling (TPS). By enabling on-the-fly estimation of the committor probability and simultaneously deriving a human-interpretable reaction coordinate, AIMMD offers a robust framework for elucidating the mechanistic pathways of complex molecular processes. This commentary provides a discussion and critical analysis of the core AIMMD framework, explores its recent extensions, and offers an assessment of the method's potential impact and limitations.

Fields of Study & Subjects

Advanced Physical and Chemical Molecular Interactions Protein Structure and Dynamics Computational Drug Discovery Methods

Publication details

Journal / source
arXiv (Cornell University)
Publication date
3 February 2026
Document type
Preprint