APPL Hyperspectral_Imaging_Dataset_for_Heritability_Analysis_in_Populus_trichocarpa

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Authors: Mengjun Shu, John H. Lagergren, Anne Elizabeth Harman-Ware, Olivia Schroeder, Tao Yao, Larry York, Jin‐Gui Chen, Gerald Tuskan
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Abstract

This dataset contains hyperspectral imaging data collected at the Advanced Plant Phenotyping Laboratory (APPL) at Oak Ridge National Laboratory. Natural variants of Populus trichocarpa were imaged using a high-throughput hyperspectral phenotyping pipeline to quantify spectral reflectance traits for downstream quantitative genetics analyses. The dataset includes hyperspectral image files and derived reflectance data products suitable for extracting spectral features across the measured wavelength range (e.g., VNIR and/or SWIR, depending on instrument configuration), along with associated sample metadata (e.g., genotype identifiers, experimental design factors, and imaging run identifiers). These data were generated to support analyses of broad-sense heritability of hyperspectral traits and their relationships with biochemical phenotypes (including lignin traits from Py-MBMS).

Fields of Study & Subjects

Spectroscopy and Chemometric Analyses Remote Sensing in Agriculture Genetic Mapping and Diversity in Plants and Animals

Publication details

Journal / source
DOE Oak Ridge National Laboratory (ORNL) Repository
Publication date
29 January 2026
Document type
Dataset