U-Net segmentation of the kidney on noncontrast CT for kidney stones location: a deep learning model for Mexican patients

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Authors: Luis Pérez, Arón Hernández-Trinidad, Teodoro Cordova Fraga, Rafael Guzman Cabrera, Adán López Valencia, Martha Alicia Hernández-González
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Abstract

This work presents the implementation of convolutional neural networks for the automated detection and segmentation of kidney stones in non-contrast computed tomography (CT) medical images from patients of the Mexican Institute of Social Security (IMSS). A U-Net architecture was employed to segment the kidneys and delineate regions of interest in high-resolution CT slices, with ground truth annotations provided by medical specialists. The model was trained and validated on a curated dataset representative of the Mexican population, achieving a Dice similarity coefficient of 0.9808 ± 0.038, an IoU of 0.9623 ± 0.0073, and a validation loss of 0.0040 ± 0.008 in five-fold crossvalidation. The proposed system demonstrated rapid convergence and excellent agreement with manual segmentations, confirming its utility as a reliable diagnostic aid for kidney stone detection in clinical practice.

Fields of Study & Subjects

Kidney Stones and Urolithiasis Treatments Renal cell carcinoma treatment Pediatric Urology and Nephrology Studies

Publication details

Journal / source
Revista Mexicana de Física
Volume
72
Issue
1 Jan-Feb
Publication date
1 January 2026