OmicNetR: Network-Based Integration of Multi-Omics Data Using Sparse CCA
Abstract
Provides an end-to-end workflow for integrative analysis of two omics layers using sparse canonical correlation analysis (sCCA), including sample alignment, feature selection, network edge construction, and visualization of gene-metabolite relationships. The underlying methods are based on penalized matrix decomposition and sparse CCA (Witten, Tibshirani and Hastie (2009) ), with design principles inspired by multivariate integrative frameworks such as mixOmics (Rohart et al. (2017) ).
Publication details
- Publication date
- 8 January 2026
- Document type
- Dataset