Rumen Microbial Composition and Fermentation Variables Associated with Methane Production in Italian Simmental Dairy Cows

The study investigated differences in ruminal and fecal microbiota composition, fermentation traits, and volatile organic compounds (VOC) in Simmental dairy cows classified as high (HME) or low (LME) methane emitters. Methane emissions from 48 cows were quantified using the Laser Methane Smart portable gas detector. The 12 animals with the highest and lowest emissions were selected and assigned to the HME and LME groups, respectively, balanced for body weight, days in milk, and body condition score. Rumen fluid and fecal samples were analyzed for pH, ammonia, volatile fatty acids (VFA), VOC, and microbiota composition. As expected, CH4 emissions were significantly higher in HME than in LME cows (22.5 vs. 13.2 g/kg DMI; 16.9 vs. 8.4 g/kg FCM). The neutral detergent fiber digestibility was higher in HME cows (51.4% vs. 47.9%). The valeric acid concentration and the acetate-to-propionate ratio were significantly higher in HME cows (3.53 vs. 3.31). The VOC profiles significantly differed between groups in both feces and rumen fluid. The microbiota analysis revealed a significant difference between groups at the order and genus levels (Bray–Curtis dissimilarity). The Shannon index was higher in LME cows (2.08 vs. 1.95). HME cows exhibited a higher abundance of Methanosphaera and Methanobacteriales. Overall, the results indicate that re-shaping the rumen microbial community can play a key role in reducing methane emissions, strengthening the case for microbiome-driven approaches and offering insights that can support mitigation strategies across dairy production systems.