Bioactive Compounds from Agro-Industrial By-Products: Green Recovery Technologies, Analytical Characterization, and Industrial Applications

This review critically analyzes bioactive compounds derived from agro-industrial by-products, including polyphenols, natural pigments, dietary fiber, prebiotics, lipids, proteins, and bioactive peptides. The review examines their chemical characteristics, major agro-industrial sources, and recovery strategies, highlighting both conventional technologies and emerging green technologies, such as ultrasound-assisted extraction, supercritical fluids, and natural deep eutectic solvents (NADESs). Across compound classes, common patterns are identified, including the importance of external plant tissues as primary biological reservoirs, as well as a methodological convergence in extraction processes despite the wide chemical diversity of the molecules. Shared challenges related to compound stability, scalability, and process efficiency are also discussed. The results demonstrate that agro-industrial by-products should be understood as complex, integrated matrices rather than isolated sources of individual compounds, thereby supporting the development of unified biorefinery schemes. Unlike previous reviews focused on individual compound classes, this review integrates multiple classes of bioactive compounds, green extraction technologies, analytical characterization strategies, and industrial valorization approaches within a circular biorefinery framework. In conclusion, this review helps bridge the current fragmented understanding of waste valorization and highlights key opportunities for the sustainable development of high-value-added functional ingredients within the framework of the circular economy.