CEBRA c-Fos Brain Imaging Data

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Authors: Zachary Freyberg, Alan M. Watson, Ryan Wellington Logan, Iaroslavna Vasylieva, Reese Smith, Silas A. Buck, Eshan Aravind
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Abstract

This dataset is part of a whole-brain imaging project that uses ribbon scanning confocal imaging of cleared whole mouse brains that have been injected with saline or morphine, and sacrificed 1 or 4 hours post injection. These brains were stained for c-Fos neuronal activity marker to map the whole brain response to morphine exposure. This also contains training data for the cell classification models used in the experiment, small 3D image cubes cut out of larger images containing either examples of "cells" or "non-cells".

Fields of Study & Subjects

Cell Image Analysis Techniques Advanced Fluorescence Microscopy Techniques Single-cell and spatial transcriptomics

Publication details

Journal / source
Brain Image Library
Publication date
1 January 2026