Topological Deep Learning for Coral Reefs

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Authors: JAIME AGUILAR-ORTIZ, Ocotlán Díaz-Parra, Jorge A. Ruíz-Vanoye, Marco A. Vera-Jiménez, Víctor Manuel Zamudio-García, Carlos R. Domínguez-Mayorga
Cited by: 0
References: 46

Abstract

The conservation of marine ecosystems, especially coral reefs, requires advanced tools to capture their complexity. This chapter proposes integrating deep autoencoder neural networks with algebraic topology to analyze and reconstruct marine data. Persistent homology detects invariant topological features components, cycles, cavities across filtration scales. Combined with autoencoders, it reduces dimensionality and preserves topology during encoding and decoding. The process involves data preprocessing, latent-space training, persistence diagrams, Betti curves, and evaluation through mean squared error and Wasserstein distance. Results show that topologically informed models enhance interpretability, reveal reef health indicators, and improve transparency. This fusion of AI and topology supports sustainable ocean conservation through robust monitoring and predictive frameworks aligned with global goals. All the code can be consulted at: https://github.com/JAIME6609/WATER-MODELS/blob/main/ARRECIFES-TOPOLOGIA-02C-INGLES.py

Fields of Study & Subjects

Topological and Geometric Data Analysis Advanced Graph Neural Networks Advanced Neural Network Applications

Publication details

Pages
215–248
Publication date
7 January 2026
Language
NG
Document type
Book chapter