MetroSCREEN ref data

MM.nodup.new.rds: stores the processed gene list for each MetaModule. MM.meta.rds: stores detailed information for the MetaModules. RP_score.rds: stores a regulatory potential (RP) score matrix, where rows represent genes and columns represent ChIP-seq dataset IDs from CistromeDB. Because CistromeDB contains multiple ChIP-seq experiments for the same TF, each TF–dataset combination is assigned a unique ID, which corresponds one-to-one to the sample_id in the LISA results. Each entry in the matrix quantifies the regulatory potential of the TF (from that specific ChIP-seq dataset) to regulate the given gene. ligand_target_matrix.rds: stores the regulatory potential scores linking ligands to target genes. lr_network.rds: stores ligand–receptor relationships.