MetaHQ: v1.2.0

Zenodo (CERN European Organization for Nuclear Research) 2026 Dataset Open access

Read full text
Authors: Hicks, Parker, Valtadoros, Lydia, Mancuso, Christopher, Alquaddoomi, Faisal, Johnson, Kayla, Sundar, Sneha, Davis, Sean, Krishnan, Arjun
DOI: 10.5281/zenodo.17663086
Cited by: 0

Abstract

v1.2.0 of the MetaHQ data package - data required to utilize the metahq-cli Python package. Changes made: Adds over 360,000 samples and 16,000 studies to the MetaHQ database Harmonized over 89,000 DiSignAtlas sample-level tissue annotations Harmonized over 351,000 sample-level annotations from Gemma Included additional RNA-Seq annotations from Johnson_2023 Harmonized Gemma sex and age annotations Fixed a bug in the build pipeline where some Gemma tissue annotations would be overwritten Includes additional sample and series metadata fields using OmicIDX (https://github.com/omicidx/omicidx) Adds mappings to samples and studies in MetaHQ to refine.bio Bumps UBERON and MONDO ontology obo files to the latest versions

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
11 September 2026
Language
EN
Document type
Dataset