bokulich-lab/q2-annotate: 2026.7.0

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Authors: Michal Ziemski, Santiago Castro Dau, Liz Gehret, Colin Wood, VinzentRisch, Evan Bolyen, Q2-D2, Anthony Simard, Felicia Sandberg, Keegan Evans, Doriela Grabocka, Greg Caporaso
+6 more Chloe Herman, Nicholas Bokulich, Athanasia Sapountzi, Macabe Wood, Matthew Ryan Dillon, Mike Robeson
Cited by: 0

Abstract

What's Changed MAINT: remove sorting from the binning action and require sorted alignment maps by @fethalen in https://github.com/bokulich-lab/q2-annotate/pull/331 NEW: PR template by @lizgehret in https://github.com/bokulich-lab/q2-annotate/pull/345 ENH: add filter-reads-kraken2 action by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/340 ENH: introduce a new SemiBin2-based binning action by @fethalen in https://github.com/bokulich-lab/q2-annotate/pull/343 MAINT: move multiply-tables action to q2-feature-table by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/348 MAINT: rename pangenome actions by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/344 MAINT: add env files for 2026.4.0 by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/352 ENH: update extract-annotations to generate per-contig feature table by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/328 FIX: fix the infra-clade bug by @Macabe222 in https://github.com/bokulich-lab/q2-annotate/pull/347 FIX: paginate results when fetching Kraken 2 DBs by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/346 MAINT: move binning- and MAG-related actions to q2-mag by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/350 PAIRED: move the human pangenome filtering actions from q2-annotate by @lizgehret in https://github.com/bokulich-lab/q2-annotate/pull/356 BUG: remove the broken Diamond example code by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/357 IMP: add properties on the eggnog outputs to make them more specific by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/359 MAINT: update copyright headers by @misialq in https://github.com/bokulich-lab/q2-annotate/pull/360 New Contributors @Macabe222 made their first contribution in https://github.com/bokulich-lab/q2-annotate/pull/347 Full Changelog: https://github.com/bokulich-lab/q2-annotate/compare/2026.4.0...2026.7.0

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
24 July 2026