Code and Supplementary Table 1

Zenodo (CERN European Organization for Nuclear Research) 2026 Open access

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Authors: shao, lingduo
DOI: 10.5281/zenodo.17792126
Cited by: 0

Abstract

1-prefetch.sh: Batch download of SRA data2-fasterq-dump.sh: Extract FASTQ files from SRA3-fastq-clean.sh: FASTQ file quality control4-hisat.sh: Download the HISAT2 genome index5-hisat2-run.sh: Compare the FASTQ files to the reference genome6-sorted.sh: Convert SAM to BAM7_featurecounts: Quantitative gene expression

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
15 May 2026