autoflatten: automatically create cortical flatmaps from FreeSurfer surfaces

Zenodo (CERN European Organization for Nuclear Research) 2026 Open access

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Authors: Visconti di Oleggio Castello, Matteo, Gallant, Jack L.
DOI: 10.5281/zenodo.17933205
Cited by: 0

Abstract

Python pipeline for automatically creating flattened versions of FreeSurfer cortical surfaces. Features JAX-accelerated optimization with vectorized gradient descent, template-based cut mapping via FreeSurfer's surface registration, and FreeSurfer-compatible patch file output.

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
21 September 2026
Language
EN