Source Data for Main Figures 1-5 and Extended Data Figures 1-6. Gladstone et al. NatMicro. 2026

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Authors: Rebecca Ashley Gladstone
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Abstract

Fig1_source_data.xlsx Count data for graph Figure2_source data_carriage.csv, Figure2_source_data_BSI.csv Input for the invasiveness model; K and lineage for each isolate in the UK carriage and BSI collections Figure3A_source_data.tre Figure3B_source_data.tre Figure3AB_source_metadata.csv ST131 dated phylogeny ST69 dated phylogeny ST131 and ST69 metadata Figure4A_source_data.csv Figure4B_source_data.csv Recombination and MMD. Statistical source data. O,H,K type and lineage designations per isolate. Statistical source data. Figure5B_source_data.nwk Figure5AB_source_metadata.csv Figure5A_source_data.csv Figure5B_source_data.csv Figure5A_source_data.nwk G2 K-loci phylogenetic tree G2 and G3 metadata G2 K-loci gene presence absence G3 K-loci gene presence absence G3 K-loci phylogenetic tree EDF_1_2_3_source_data.xlsx K-type counts by age and sex for graph EDF_1_2_3_source_data.xlsx K-type counts by age and sex for graph EDF_1_2_3_source_data.xlsx K-type counts by age and sex for graph EDF4_source_data.csv Atypical gggenes input file for figure EDF4_source_data.csv K4 gggenes input file for figure EDF4_source_data.csv K5 gggenes input file for figure

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
5 January 2026
Document type
Dataset