microntology annotations of publicly available metagenomes in the European Nucleotide Archive

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Authors: Anthony Fullam, Vishnu Prasoodanan P K, Thomas S. B. Schmidt
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Abstract

microntology annotations of >300k metagenomic samples from the European Nucleotide Archive (ENA). The `tsv` file contains one row per (bio)sample and the following columns: ena_project_id : ENA project accession (if applicable) study_name : assigned (human-readable) study name, following the form [firstauthorlastname]_[year]_[descriptive_tag] and compatible with study names in metalog.embl.de and spire.embl.de ena_ers_sample_id : ENA sample accession (if applicable) sample_name : assigned sample name (human readable), if deviating from ENA sample ID microntology : `;`-separated microntology terms assigned to sample See https://zenodo.org/records/18162129 for a list of microntology IDs and corresponding terms, as well as term hierarchy.

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
6 January 2026
Document type
Dataset