Workflow to Split, Filter, Normalize and Integrate Sequencing Data
Abstract
A Snakemake workflow to split, filter, normalize, integrate and select highly variable features of count matrices resulting from experiments with sequencing readout (e.g., RNA-seq, ATAC-seq, ChIP-seq,...) including diagnostic visualizations.
Fields of Study & Subjects
Single-cell and spatial transcriptomics
Genomics and Phylogenetic Studies
Scientific Computing and Data Management
Publication details
- Journal / source
- Zenodo (CERN European Organization for Nuclear Research)
- Publication date
- 9 January 2026