Carrot-Mapper

Zenodo (CERN European Organization for Nuclear Research) 2026 Open access

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Authors: Sam Cox, Philip Quinlan, Emily A. Jefferson, A P Rae, Tri Thien Nguyen, Vasiliki Panagi, Daniel Lea, Emeka Akashili, Calum Macdonald, Simon Tarr, Sam Adejumo, Shahzad Mumtaz
+1 more Roberto Santos
DOI: 10.5281/zenodo.18207609
Cited by: 0

Abstract

Carrot Mapper is a web application which enables users to use the metadata (as output by WhiteRabbit) from a dataset to produce mapping rules to the OMOP standard, in the JSON format. These can be ingested by Carrot Transform to perform the transformation of the contents of the dataset to OMOP.

Fields of Study & Subjects

Biomedical Text Mining and Ontologies Research Data Management Practices Electronic Health Records Systems

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
9 January 2026