rodritools: python methods for genomic sequence manipulation

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Authors: Rodrigo Santamaría
Cited by: 1

Abstract

rodritools is a toolset of several python scripts with methods to manipulate genomic sequences. In particular: bioio implements methods to read into python data objetcs sequences from several formats, and viceversa bioseq implements various basic sequence manipulations and transforms biosearch implements methods to search for patterns in genomic sequences bwserch implement more complex search methods, based on Burrows-Wheeler transform For a more detailed and updated description of scripts and methods check https://github.com/rodrigoSantamaria/rodritools

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
11 January 2026