extract_genes_abricate.py

Zenodo (CERN European Organization for Nuclear Research) 2026 Open access

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Authors: Boas C.L. van der Putten
DOI: 10.5281/zenodo.18218679
Cited by: 0

Abstract

Small script to use ABRicate output to extract genes from genome assemblies, reverse complement if necessary, and print to a file

Fields of Study & Subjects

Genomics and Phylogenetic Studies Antibiotic Resistance in Bacteria Bacteriophages and microbial interactions

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
12 January 2026