Four-Layer Protocol for Distributed Theory Formation: A Methodological Framework for Decentralized and Auditable Knowledge Production

This deposit presents Version 1.0 of a four-layer epistemic protocol designed to support distributed, auditable, and evolvable theory formation. Contemporary research ecosystems face a structural tension between the need for stable, citable concepts and the realities of iterative development, multi-agent collaboration, and open scientific discourse. The protocol addresses this challenge by delineating four methodological layers: Concept Layer: establishes canonical theoretical authority through DOI-anchored archival deposition. Code / Artifact Layer: operationalizes theory as version-controlled, inspectable, and forkable artifacts. Discourse Layer: enables open interpretation, critique, and theoretical extension without destabilizing the canonical core. Attribution Layer: ensures transparent provenance and equitable credit assignment via persistent identifiers and contribution histories. Together, these layers form a minimal complete epistemic infrastructure for decentralized scientific practice, allowing theory to remain stable at its core while supporting continuous refinement at its periphery. This release serves as the canonical reference for the protocol, anchoring future versions, implementations, and community-driven extensions. Keywords: Distributed Science; Open Science; Epistemic Infrastructure; DeSci; Multi-Agent Collaboration; Attribution Systems; Methodology