Li-Chia-ching/Alfalfa_Phenotypic_Clustering_Analysis: v2.0: Alfalfa Phenotype Clustering (Colorblind-Friendly Edition)

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Authors: Jiaqing Li
Cited by: 0

Abstract

Major Updates / 主要更新: Enhanced Visualization / 增强可视化: Branch lines changed to black for better clarity (树枝线条改为黑色,提升清晰度) Line width adjusted to 1.5pt (线宽调整为1.5磅) Maintained Accessibility / 保持可访问性: Dark2 color scheme preserved for labels and color bars (标签和色块维持Dark2配色方案) Cluster legend colors unchanged for color-blind friendly display (图例颜色不变,色弱友好) Added Interpretation Guide / 新增分类解释指南: New 04_Cluster_Interpretation.txt file explains cluster meaning and limitations (新增解释文件说明聚类意义和局限性) Provides optimization suggestions for future analysis (提供后续分析优化建议) Technical Details / 技术细节: Updated code: set("branches_col", "black") and set("branches_lwd", 1.5) (更新代码:设置树枝颜色和宽度) Maintained: color_labels(k = k, col = cluster_cols) with Dark2 palette (维持:使用Dark2配色的标签颜色) Key Benefit / 主要优势: Clearer dendrogram visualization with enhanced readability while maintaining accessibility. (更清晰的树状图可视化,提升可读性,同时保持可访问性)

Fields of Study & Subjects

Genetics and Plant Breeding Agricultural Productivity and Crop Improvement Genetic and Environmental Crop Studies

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
16 January 2026