Four sequences with various levels of repetitiveness extracted from the human T2T-CHM13v2.0 reference

Zenodo (CERN European Organization for Nuclear Research) 2026 Dataset Open access

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Authors: Haonan Wu
DOI: 10.5281/zenodo.18303510
Cited by: 0

Abstract

Dataset Name Chromosome Start Position Number of kmers Default k Number of distinct kmers Biological significance D-easy/chr6_RepeatMasker Chr6 559,707 100,000 20 98,786 arbitrary region D-med/chrY_RBMY1A1 ChrY 22,410,155 14,400 20 13,727 RBMY1A gene D-hard/chrY_SimpleRepeat ChrY 22,420,785 2,264 10 1,199 simple repeat D-hardest/chr21_centromere Chr21 10,962,854 100,000 30 3,987 centromere

Fields of Study & Subjects

Genomics and Phylogenetic Studies Chromosomal and Genetic Variations Algorithms and Data Compression

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
19 January 2026
Document type
Dataset