Spatial transcriptomic analysis of the human retina reveals long-term molecular alterations following COVID‑19

This repository contains R scripts used to reproduce the analyses and figures presented in the associated manuscript. The code implements cross-platform validation of NanoString GeoMx DSP expression data against human retinal and RPE scRNA-seq datasets, layer-restricted deconvolution using non-negative least squares (NNLS), and downstream visualization and pathway analyses. Each script corresponds to a specific main or supplementary figure in the manuscript and is provided for transparency and reproducibility. This version (v1.0) reflects the analyses used in the submitted manuscript.