alessandropiccin/CELL-REPORTS-D-25-02524: Fiber photometry analysis pipeline
Abstract
Overview This repository provides custom-built software tools for fiber photometry analysis from one or two brain regions simultaneously. The pipeline processes raw photometry CSV files and behavioral event files to produce peri-event signals per trial. Key features End-to-end workflow: CSV + behavioral events → peri-event signal on each trial Trial database generation using phautom_17b.py Selective trial exploration / analysis using phanal.py Synchronization of behavioral and photometry streams by matching intervals from TTL pulse trains Documentation See Fiberphotometry_Pipeline.docx for usage instructions and workflow details. Suggested citation Please cite this release via its Zenodo DOI.
Fields of Study & Subjects
Neuroscience and Neuropharmacology Research
Advanced Fluorescence Microscopy Techniques
Neural dynamics and brain function
Publication details
- Journal / source
- Zenodo (CERN European Organization for Nuclear Research)
- Publication date
- 10 February 2026
- Language
- EN