CrossCell Benchmark: Single-Cell Data Format Conversion
Abstract
42 Seurat RDS files (V4/V5 × raw/processed × 11 datasets from SeuratData) + 13 H5AD files (CELLxGENE, scanpy, scvelo, squidpy). Cell counts range from 1,438 to 73,655. Full details in `benchmark/data/datasets.json`.
Fields of Study & Subjects
Single-cell and spatial transcriptomics
Scientific Computing and Data Management
Cell Image Analysis Techniques
Publication details
- Journal / source
- Zenodo (CERN European Organization for Nuclear Research)
- Publication date
- 11 February 2026
- Language
- EN
- Document type
- Dataset