CrossCell Benchmark: Single-Cell Data Format Conversion

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Authors: Zhi Wang
Cited by: 0

Abstract

42 Seurat RDS files (V4/V5 × raw/processed × 11 datasets from SeuratData) + 13 H5AD files (CELLxGENE, scanpy, scvelo, squidpy). Cell counts range from 1,438 to 73,655. Full details in `benchmark/data/datasets.json`.

Fields of Study & Subjects

Single-cell and spatial transcriptomics Scientific Computing and Data Management Cell Image Analysis Techniques

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
11 February 2026
Language
EN
Document type
Dataset