JUMP and JUMP-lite indices and associated tables

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Authors: Alán F. Muñoz
Cited by: 0

Abstract

Multiple useful tables to query specific images from JUMP and/or map them to JUMP-lite. It includes dense and tidy versions of both JUMP and JUMP-lite. Dense have one column per URL type (e.g., URL_OrigDNA) whereas the tidy version has one image per row, adding the `Metadata_Channel` and `uri` columns. We also include redlist and graylist tables for plates/batches that should be used under none or some circumstances respectively. The redlist are known to have technical issues, whereas the graylist has plates filled exclusively with negative controls.

Fields of Study & Subjects

Cell Image Analysis Techniques Research Data Management Practices Genomics and Phylogenetic Studies

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
12 February 2026
Language
EN
Document type
Dataset