Konnektor: A Tool for Planning Free Energy Networks

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Authors: Benjamin Ries, Richard J. Gowers, Hannah M. Baumann, David A. Swenson, Irfan Alibay, Michael M. Henry, James R. B. Eastwood, Alyssa Travitz
Cited by: 0

Abstract

Changelog for humans https://konnektor.openfree.energy/en/latest/CHANGELOG.html#v0-4-0 All PRs included in this release: unpin numpy by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/220 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/OpenFreeEnergy/konnektor/pull/222 bump github action versions by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/223 remove gufe classes from konnektor namespace by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/225 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/OpenFreeEnergy/konnektor/pull/226 clean up API doc TOC by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/231 fix installation guide formatting by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/228 remove application section by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/230 move intro paragraphs to a separate introduction section by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/229 add zenodo badge by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/233 clean up abstract network generator and planner by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/232 network generator clean up by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/236 add news item for 232 by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/235 Clean up concatenators by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/241 update all imports to be strings by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/238 [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci[bot] in https://github.com/OpenFreeEnergy/konnektor/pull/249 fix network_analysis docstrings by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/242 deprecate network_analysis.get_is_connected by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/250 clean up network tools types and docstrings by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/248 tidy up high-level docs by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/246 Release prep 0.4.0 by @atravitz in https://github.com/OpenFreeEnergy/konnektor/pull/252 Full Changelog: https://github.com/OpenFreeEnergy/konnektor/compare/v0.3.0...v0.4.0

Fields of Study & Subjects

Computational Drug Discovery Methods Bioinformatics and Genomic Networks Scientific Computing and Data Management

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
4 March 2026
Language
EN