PHYLUCE_GUI: GUI + wrappers for PhyLUCE Tutorial IV workflows

The software, including Stampy components, is provided "AS IS," without warranty of any kind, express or implied, including but not limited to the warranties of merchantability, fitness for a particular purpose, and non-infringement. In no event shall the authors or copyright holders be liable for any claim, damages, or other liability, whether in an action of contract, tort, or otherwise, arising from, out of, or in connection with the software or the use or other dealings in the software. Furthermore, use of this software is strictly restricted to non-commercial purposes only (as defined by the accompanying Creative Commons Attribution-NonCommercial 4.0 International License or similar academic license terms); any commercial use requires obtaining a separate license from the original copyright holders. About This is a simple Graphical User Interface (GUI) for the PHYLUCE pipeline that tries to mirror the Tutorial IV from the PHYLUCE Readthedocs : https://phyluce.readthedocs.io/en/latest/tutorials/tutorial-4.html I have tested PHYLUCE_GUI with 47 arthropod genomes on a linux laptop with 32GB of mem so it should work on a laptop for small projects around this size. If you use this code you must also cite PHYLUCE and Stampy along with a few other helpers LASTAL The GUI will help students and users of all levels keep organized and make the bar to entry of doing phylogenomics less intimidating. There are also a few good things that I added such as accepting spaces in some (but not all ) file names (spaces in file names should be avoided) it also solve a memory bloom issue at the lastz alignment step by writing the sql database in a step-wise manner. Other than these small additions it is basically PHYLUCE wrapped in a GUI, that students can run on their laptops. It assumes you already have assembled genomes. OK have fun with it and I hope it helps to improve your phylogenomic workflow.