github.com/iwc-workflows/hyphy/hyphy-compare

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Authors: Danielle Callan, Hannah Verdonk, Sergei L. Kosakovsky Pond
Cited by: 0

Abstract

This workflow runs HyPhy analyses Contrast-FEL and RELAX comparing foreground and reference branches. It consumes the per-gene codon-aware alignments and IQ-TREE phylogenies produced by the HyPhy preprocessing workflow.

Fields of Study & Subjects

Genomics and Phylogenetic Studies RNA and protein synthesis mechanisms Evolution and Genetic Dynamics

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
12 March 2026
Language
EN