Fine-tuning sequence-to-expression models on personal genome and transcriptome data

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Authors: Ruchir Rastogi, Aniketh Janardhan Reddy, Ryan Chung, Nilah M. Ioannidis
Cited by: 1

Abstract

The code base for our work on improving the performance of sequence-to-expression models for making individual-specific gene expression predictions by fine-tuning them on personal genome and transcriptome data. This code was used to produce the results in our paper, please refer to GitHub for the most up-to-date code (https://github.com/ni-lab/finetuning-enformer).

Publication details

Journal / source
Zenodo (CERN European Organization for Nuclear Research)
Publication date
15 March 2026