Data and code for Urbanization Increases the Complexity of Soil Microbial Interaction Networks
Abstract
This Zenodo repository contains the processed data and analysis scripts supporting the findings of this study. The dataset includes:(1) OTU tables used for microbial community analyses;(2) Alpha diversity data;(3) R scripts used for data analysis and figure generation. (4)The source data for Figures. -Figure1.csv: source data for Figure 1 - Figure2.csv: alpha diversity indices used in Figure 2d–f. The source data for Figure 2a-c were based on OTU data. - Figure3.csv: input data for random forest analysis (Figure 3b, d, f). The source data for Figure 3a, c, e were based on OTU data. - Figure4a-d, 4e-h, 4i-l.csv: network topology metrics - Figure5.csv: input data for structural equation modeling (SEM) - The source data for Figure6 were based on OTU data. Raw sequencing data have been depo,sited in the NCBI Sequence Read Archive (SRA) under accession number PRJNA1309871, PRJNA1309878, PRJNA1309853, PRJNA1309333. For questions regarding the data or code, please contact the corresponding author.
Publication details
- Journal / source
- Zenodo (CERN European Organization for Nuclear Research)
- Publication date
- 1 March 2026
- Language
- EN
- Document type
- Dataset