Yildiz-Lab/FIONAviewer_r2024: v1.0.1

FIONAviewer: SIC Step Finding and Editing GUI FIONAviewer is a graphical user interface (GUI) for SIC-based step finding and step editing, developed and used in the Yildiz Lab for single-molecule trajectory analysis. Overview This tool enables interactive identification, visualization, and refinement of step transitions in trajectory data, supporting high-precision analysis workflows commonly used in motor protein and single-molecule studies. Key Features SIC-based step finding Detect steps using statistical inference criteria (SIC). Interactive step editing Manually refine, add, or remove detected steps within a user-friendly GUI. Trajectory visualization Inspect time traces and fitted steps in an integrated environment. Development Primary developer: Vladislav Belyy Adaptation and extensions: Joseph Slivka Software Requirements MATLAB: Compatible with R2021 – R2024 Usage Context This software is used within the Yildiz Lab for step detection and analysis in single-molecule experiments. License MIT License Copyright (c) 2026 Yildiz Lab Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.