Dataset for DePass

This repository contains processed datasets for benchmarking the DePass framework, including paired spatial multi-omics and single-cell multi-omics datasets covering mouse brain Visium-MALDI, mouse spleen SPOTS, mouse embryo brain MISAR-seq, human tonsil spatial-CITE-seq, mouse embryo Spatial-mux-seq, GSE163120, 10x Multiome PBMC3k, 10x Multiome PBMC10k, TEA-seq, DOGMA-seq, HCC CITE-seq, HCC Xenium-CODEX, COAD Xenium-CODEX, and mouse brain spatial ATAC-RNA-seq. The in-house human colorectal cancer Stereo-CITE-seq dataset has been deposited separately in OMIX (accession no. OMIX013867).